this would indicate that your .exe has actually been tampered with or is not the original .exe or something is writing to your .exe. the trainer is created in such a way that your .exe is left as it is, so i have no idea what your problem is. if you attach debuggers or disassemblers or try to use cheatengine on this game you will get problems like you describe.
as pwiz said earlier, the every .exe that was sent to us has matched the .exe we used to make the trainer, so the trainer works with all the versions we have been sent so far.
no idea if i saw your .exe but our trainer has been updated to the origin .exe which also corresponds to certain 'other' versions of this game.
pwizard will post the updated trainer shortly-