If anyone has been keeping an ear to the ground and an eye on the forums you'll know that the bugs for this game are many and varied. Fortunately Double Fine are a dedicated team of Developers who will patch the game night and day until every little issue is addressed and swiftly patched or removed.
Unfortunately for the modding community and company (CheatHappens) this will mean either a lot of redundant updating or patiently waiting a week or two for the time between updates to even out.
I wished checking 'do not auto update' worked all the time, but Steam will sometimes override that. A few games I did that for in the past required you to download the patch before playing it again after a patch was released, only thing it seemed to prevent was the auto update when the patch was first released.
I'm perfectly fine waiting a week to get a working trainer if these patches get issued daily or multiple times per day.
So far this is far better then what Dungeon Defenders did.