I wasn't aware of CoSMOS, I'll have to give that a try. Thanks PWizard.
And apologies for not using the notification, wanted to also let others know in case they dropped into the topic. My bad.
I did use the update notification but it doesn't have a comments section.
Here you go. Have him standing in front of a terminal and everything. Quickest way to test is to open the hacking interface on the terminal, then use a Nuke Virus on the closest node. Alarm immediately goes off and the countdown begins. With the trainer function activated you'll see the number frozen at 00:00, but the red line continue to to move towards your home hub, causing you to fail when it gets there. The timer numbers are merely a visual representation of the enemy scan's progress, and stopping the numbers doesn't stop the scan itself. You still fail even if the timer never moves.